Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
I
|
L
|
M
|
N
|
P
|
R
|
S
|
T
|
W
|
X
A
AbstractLoader (class in edxia.io.loader.base_loader)
add_filter() (edxia.io.loader.base_loader.AbstractLoader method)
apply_impl() (edxia.composite.segmentation.Segmenter method)
(edxia.composite.segmentation.SlicSegmenter method)
(edxia.composite.segmentation.WatershedSegmenter method)
aztec_ascii_bse_format (in module edxia.io.raw_io)
aztec_ascii_map_format (in module edxia.io.raw_io)
B
blue (edxia.composite.channels.CompositeChannels attribute)
blue_factor (edxia.composite.channels.CompositeChannels attribute)
bse_format (edxia.core.experiment.MappingExperiment attribute)
C
channels (edxia.composite.composite.CompositeMap attribute)
component (edxia.core.map.Map attribute)
components (edxia.core.map.MapsStack attribute)
composite (edxia.composite.segmentation.SegmentedLabels attribute)
CompositeChannels (class in edxia.composite.channels)
CompositeMap (class in edxia.composite.composite)
composition() (edxia.core.map.MapsStack method)
copy() (edxia.io.raw_io.TextMapFormat method)
D
DefaultLoader (class in edxia.io.loader)
delimiter (edxia.io.raw_io.TextMapFormat attribute)
denoise_and_renormalise() (edxia.io.loader.PickleLoader method)
E
edxia (module)
edxia.composite (module)
edxia.composite.channels (module)
edxia.composite.composite (module)
edxia.composite.segmentation (module)
edxia.core (module)
edxia.core.experiment (module)
edxia.core.map (module)
edxia.io (module)
edxia.io.hdf5 (module)
edxia.io.loader (module)
edxia.io.loader.base_loader (module)
edxia.io.raw_io (module)
escaped_delimiter (edxia.io.raw_io.TextMapFormat attribute)
esprit_ascii_bse_format (in module edxia.io.raw_io)
esprit_ascii_map_format (in module edxia.io.raw_io)
exp_manager (edxia.io.loader.base_loader.AbstractLoader attribute)
F
filters (edxia.io.loader.base_loader.AbstractLoader attribute)
flat_map (edxia.core.map.Map attribute)
FullSlicSegmenter (class in edxia.composite.segmentation)
G
get_center_labels() (edxia.composite.segmentation.SegmentedLabels method)
get_color_labels() (edxia.composite.segmentation.SegmentedLabels method)
get_path_map() (edxia.core.experiment.MappingExperiment method)
(edxia.io.loader.base_loader.AbstractLoader method)
get_path_picklemap() (edxia.io.loader.PickleLoader method)
gray (edxia.composite.channels.CompositeChannels attribute)
gray_factor (edxia.composite.channels.CompositeChannels attribute)
green (edxia.composite.channels.CompositeChannels attribute)
green_factor (edxia.composite.channels.CompositeChannels attribute)
I
imagej_ascii_bse_format (in module edxia.io.raw_io)
index() (edxia.core.map.MapsStack method)
is_valid() (edxia.core.experiment.MappingExperiment method)
(edxia.core.experiment.PointsExperiment method)
L
label (edxia.core.experiment.MappingExperiment attribute)
(edxia.core.experiment.PointsExperiment attribute)
list_components (edxia.core.experiment.MappingExperiment attribute)
(edxia.core.experiment.PointsExperiment attribute)
load_composite() (edxia.io.loader.base_loader.AbstractLoader method)
load_composite_rgb() (edxia.io.loader.base_loader.AbstractLoader method)
load_edsmap() (edxia.io.loader.base_loader.AbstractLoader method)
load_edsmap_complex() (edxia.io.loader.base_loader.AbstractLoader method)
load_edsmap_single() (edxia.io.loader.base_loader.AbstractLoader method)
(edxia.io.loader.DefaultLoader method)
(edxia.io.loader.PickleLoader method)
(edxia.io.loader.StackLoader method)
load_pickle_map() (in module edxia.io.raw_io)
load_raw_map() (edxia.core.experiment.MappingExperiment method)
load_stack() (edxia.io.loader.base_loader.AbstractLoader method)
(edxia.io.loader.StackLoader method)
load_txt_map() (in module edxia.io.raw_io)
M
Map (class in edxia.core.map)
map (edxia.core.map.Map attribute)
map() (edxia.core.map.MapsStack method)
map_format (edxia.core.experiment.MappingExperiment attribute)
MappingExperiment (class in edxia.core.experiment)
maps (edxia.core.map.MapsStack attribute)
MapsStack (class in edxia.core.map)
max_value (edxia.io.raw_io.TextMapFormat attribute)
min_value (edxia.io.raw_io.TextMapFormat attribute)
N
nb_cols (edxia.core.map.Map attribute)
nb_components (edxia.composite.channels.CompositeChannels attribute)
nb_labels (edxia.composite.segmentation.SegmentedLabels attribute)
nb_rows (edxia.core.map.Map attribute)
normalize() (edxia.core.map.MapsStack method)
P
parent (edxia.core.experiment.PartOfExperiment attribute)
PartOfExperiment (class in edxia.core.experiment)
pattern (edxia.core.experiment.MappingExperiment attribute)
PickleLoader (class in edxia.io.loader)
PointsExperiment (class in edxia.core.experiment)
R
rc() (edxia.core.map.Map method)
read_composite() (in module edxia.io.hdf5)
read_dataset() (in module edxia.io.hdf5)
read_experiment() (in module edxia.io.hdf5)
read_points() (in module edxia.io.hdf5)
read_stack() (in module edxia.io.hdf5)
red (edxia.composite.channels.CompositeChannels attribute)
red_factor (edxia.composite.channels.CompositeChannels attribute)
remove_npy_files() (edxia.io.loader.PickleLoader method)
reset_filters() (edxia.io.loader.base_loader.AbstractLoader method)
(edxia.io.loader.PickleLoader method)
S
save_dataset() (in module edxia.io.hdf5)
save_pickle_map() (in module edxia.io.raw_io)
save_txt_map() (in module edxia.io.raw_io)
saveformat (edxia.io.raw_io.TextMapFormat attribute)
SegmentedLabels (class in edxia.composite.segmentation)
Segmenter (class in edxia.composite.segmentation)
shape (edxia.core.map.Map attribute)
(edxia.core.map.MapsStack attribute)
SlicSegmenter (class in edxia.composite.segmentation)
StackLoader (class in edxia.io.loader)
sum_of_oxides_from_mass() (edxia.core.map.MapsStack method)
T
TextMapFormat (class in edxia.io.raw_io)
to_atomic() (edxia.core.map.MapsStack method)
W
WatershedSegmenter (class in edxia.composite.segmentation)
X
xy() (edxia.core.map.Map method)
Navigation
Contents:
About
Install
Input files
Main concepts
edxia/Glue
API
Related Topics
Documentation overview
Quick search